The Petit Publications is produced by the communications team at the Parker H. Petit Institute for Bioengineering and Bioscience at Georgia Institute of Technology. Features the bio-related publications for the month. Contact us.
Georgia Tech: Parker H. Petit Institute for Bioengineering & Bioscience - Publications: Monthly Recap
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Featured Publications
Nature Materials
Cellular Mechanotransduction: Sensing Rigidity
García JR, García AJ
Nature Materials
Materials as Stem Cell Regulators
Murphy WL, McDevitt TC, Engler AJ
Nature Biotechnology
Sequencing of Diverse Mandarin, Pummelo and Orange Genomes Reveals Complex History of Admixture during Citrus Domestication
Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D
Science
Lignin Valorization: Improving Lignin Processing in the Biorefinery
Ragauskas AJ, Beckham GT, Biddy MJ, Chandra R, Chen F, Davis MF, Davison BH, Dixon RA, Gilna P, Keller M, Langan P, Naskar AK, Saddler JN, Tschaplinski TJ, Tuskan GA, Wyman CE
Nature Reviews Microbiology
The Elemental Composition of Virus Particles: Implications for Marine Biogeochemical Cycles
Jover LF, Effler TC, Buchan A, Wilhelm SW, Weitz JS
Accounts of Chemical Research
Microgel Mechanics in Biomaterial Design
Saxena S, Hansen CE, Lyon LA
Nature Neuroscience
The Needle in the Haystack
Shephard CJ, Stanley GB
ACS Nano
Electrically Tunable Plasmonic Behavior of Nanocube-polymer Nanomaterials Induced by a Redox Active Electrochromic Polymer
König TA, Ledin PA, Kerszulis J, Mahmoud MA, El-Sayed MA, Reynolds JR, Tsukruk VV
Journal of Clinical Investigation
Flow-dependent Epigenetic DNA Methylation Regulates Endothelial Gene Expression and Atherosclerosis
Dunn J, Qiu H, Kim S, Jjingo D, Hoffman R, Kim CW, Jang I, Son DJ, Kim D, Pan C, Fan Y, Jordan IK, Jo H
Annual Review of Biomedical Engineering
Computational Modeling of Cardiac Valve Function and Intervention
Sun W, Martin C, Pham T
Nature Communications
Molecular Traces of Alternative Social Organization in a Termite Genome
Terrapon N, Li C, Robertson HM, Ji L, Meng X, Booth W, Chen Z, Childers CP, Glastad KM, Gokhale K, Gowin J, Gronenberg W, Hermansen RA, Hu H, Hunt BG, Huylmans AK, Khalil SM, Mitchell RD, Munoz-Torres MC, Mustard JA, Pan H, Reese JT, Scharf ME, Sun F, Vogel H, Xiao J, Yang W, Yang Z, Yang Z, Zhou J, Zhu J, Brent CS, Elsik CG, Goodisman MA, Liberles DA, Roe RM, Vargo EL, Vilcinskas A, Wang J, Bornberg-Bauer E, Korb J, Zhang G, Liebig J
   
Biology
Nature Biotechnology
Sequencing of Diverse Mandarin, Pummelo and Orange Genomes Reveals Complex History of Admixture during Citrus Domestication
Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D
Journal of Clinical Investigation
Flow-dependent Epigenetic DNA Methylation Regulates Endothelial Gene Expression and Atherosclerosis
Dunn J, Qiu H, Kim S, Jjingo D, Hoffman R, Kim CW, Jang I, Son DJ, Kim D, Pan C, Fan Y, Jordan IK, Jo H
Nature Communications
Molecular Traces of Alternative Social Organization in a Termite Genome
Terrapon N, Li C, Robertson HM, Ji L, Meng X, Booth W, Chen Z, Childers CP, Glastad KM, Gokhale K, Gowin J, Gronenberg W, Hermansen RA, Hu H, Hunt BG, Huylmans AK, Khalil SM, Mitchell RD, Munoz-Torres MC, Mustard JA, Pan H, Reese JT, Scharf ME, Sun F, Vogel H, Xiao J, Yang W, Yang Z, Yang Z, Zhou J, Zhu J, Brent CS, Elsik CG, Goodisman MA, Liberles DA, Roe RM, Vargo EL, Vilcinskas A, Wang J, Bornberg-Bauer E, Korb J, Zhang G, Liebig J
PNAS
Metabolomics and Proteomics Reveal Impacts of Chemically Mediated Competition on Marine Plankton
Poulson-Ellestad KL, Jones CM, Roy J, Viant MR, Fernández FM, Kubanek J, Nunn BL
Nature Reviews Microbiology
The Elemental Composition of Virus Particles: Implications for Marine Biogeochemical Cycles
Jover LF, Effler TC, Buchan A, Wilhelm SW, Weitz JS
Biomedical Engineering
PNAS
Seamless Modification of Wild-type Induced Pluripotent Stem Cells to the Natural CCR5Δ32 Mutation Confers Resistance to HIV Infection
Ye L, Wang J, Beyer AI, Teque F, Cradick TJ, Qi Z, Chang JC, Bao G, Muench MO, Yu J, Levy JA, Kan YW
Journal of the Royal Society Interface
USNCTAM Perspectives on Mechanics in Medicine
Bao G, Bazilevs Y, Chung JH, Decuzzi P, Espinosa HD, Ferrari M, Gao H, Hossain SS, Hughes TJ, Kamm RD, Liu WK, Marsden A, Schrefler B
Biomaterials
The Effect of Inflammatory Cell-derived MCP-1 Loss on Neuronal Survival during Chronic Neuroinflammation
Sawyer AJ, Tian W, Saucier-Sawyer JK, Rizk PJ, Saltzman WM, Bellamkonda RV, Kyriakides TR
International Journal of Molecular Sciences
Over-expression of Catalase in Myeloid Cells Confers Acute Protection following Myocardial Infarction
Cabigas EB, Somasuntharam I, Brown ME, Che PL, Pendergrass KD, Chiang B, Taylor WR, Davis ME
Journal of Clinical Investigation
Flow-dependent Epigenetic DNA Methylation Regulates Endothelial Gene Expression and Atherosclerosis
Dunn J, Qiu H, Kim S, Jjingo D, Hoffman R, Kim CW, Jang I, Son DJ, Kim D, Pan C, Fan Y, Jordan IK, Jo H
Biomaterials
Heparin Microparticle Effects on Presentation and Bioactivity of Bone Morphogenetic Protein-2
Hettiaratchi MH, Miller T, Temenoff JS, Guldberg RE, McDevitt TC
Nature Materials
Materials as Stem Cell Regulators
Murphy WL, McDevitt TC, Engler AJ
Nature Neuroscience
The Needle in the Haystack
Shephard CJ, Stanley GB
Annual Review of Biomedical Engineering
Computational Modeling of Cardiac Valve Function and Intervention
Sun W, Martin C, Pham T
JACC: Cardiovascular Imaging
CT Image-based Engineering Analysis of Transcatheter Aortic Valve Replacement
Wang Q, Primiano C, McKay R, Kodali S, Sun W
Chemical and Biomedical Engineering
Tissue Engineering Part A
Architectural and Mechanical Cues Direct Mesenchymal Stem Cell Interactions with Cross-linked Gelatin Scaffolds
McAndrews KM, Kim MJ, Lam TY, McGrail DJ, Dawson MR
Chemistry / Biochemistry
ACS Nano
Electrically Tunable Plasmonic Behavior of Nanocube-Polymer Nanomaterials Induced by a Redox Active Electrochromic Polymer
König TA, Ledin PA, Kerszulis J, Mahmoud MA, El-Sayed MA, Reynolds JR, Tsukruk VV

The Journal of Physical Chemistry A

The Spectroscopy of Homo and Heterodimers of Silver and Gold Nanocubes as a Function of Separation: A DDA Simulation
Hooshmand N, O'Neil D, Asiri AM, El-Sayed MA
PNAS
Metabolomics and Proteomics Reveal Impacts of Chemically Mediated Competition on Marine Plankton
Poulson-Ellestad KL, Jones CM, Roy J, Viant MR, Fernández FM, Kubanek J, Nunn BL
Journal of the American Society for Mass Spectrometry
An Effective Approach for Coupling Direct Analysis in Real Time with Atmospheric Pressure Drift Tube Ion Mobility Spectrometry
Keelor JD, Dwivedi P, Fernández FM
Accounts of Chemical Research
Microgel Mechanics in Biomaterial Design
Saxena S, Hansen CE, Lyon LA
Science
Lignin Valorization: Improving Lignin Processing in the Biorefinery
Ragauskas AJ, Beckham GT, Biddy MJ, Chandra R, Chen F, Davis MF, Davison BH, Dixon RA, Gilna P, Keller M, Langan P, Naskar AK, Saddler JN, Tschaplinski TJ, Tuskan GA, Wyman CE
Electrical Computer Engineering
Radiation Research Society
Association of Chromosome Translocation Rate with Low Dose Occupational Radiation Exposures in U.S. Radiologic Technologists
Little MP, Kwon D, Doi K, Simon SL, Preston DL, Doody MM, Lee T, Miller JS, Kampa DM, Bhatti P, Tucker JD, Linet MS, Sigurdson AJ
Materials Science and Engineering
Applied Optics
Composition Optimization of Scintillating Rare-earth Nanocrystals in Oxide Glass-ceramics for Radiation Spectroscopy
Barta MB, Nadler JH, Kang Z, Wagner BK, Rosson R, Cai Y, Sandhage KH, Kahn B
ACS Nano
Electrically Tunable Plasmonic Behavior of Nanocube-polymer Nanomaterials Induced by a Redox Active Electrochromic Polymer
König TA, Ledin PA, Kerszulis J, Mahmoud MA, El-Sayed MA, Reynolds JR, Tsukruk VV
Mechanical Engineering
Nature Materials
Cellular Mechanotransduction: Sensing Rigidity
García JR, García AJ
Biomaterials
Heparin Microparticle Effects on Presentation and Bioactivity of Bone Morphogenetic Protein-2
Hettiaratchi MH, Miller T, Temenoff JS, Guldberg RE, McDevitt TC
Journal of Experimental Biology
Fire Ants Actively Control Spacing and Orientation within Self-assemblages
Foster PC, Mlot NJ, Lin A, Hu DL
Integrative and Comparative Biology
Mosquitoes Actively Remove Drops Deposited by Fog and Dew
Dickerson AK, Hu DL
Physics
ChemPhysChem
Speed Dependence of Thermochemical Nanolithography for Gray-scale Patterning
Carroll KM, Desai M, Giordano AJ, Scrimgeour J, King WP, Riedo E, Curtis JE
Emory, UGA and Others

Frontiers in Plant Science

Role of the VirA Histidine Autokinase of Agrobacterium Tumefaciens in the Initial Steps of Pathogenesis
Lin YH, Pierce BD, Fang F, Wise A, Binns AN, Lynn DG
Arteriosclerosis, Thrombosis, and Vascular Biology
Polymerase δ-Interacting Protein 2 Promotes Postischemic Neovascularization of the Mouse Hindlimb
Amanso AM, Lassègue B, Joseph G, Landázuri N, Long JS, Weiss D, Taylor WR, Griendling KK
International Journal of Molecular Sciences
Over-expression of Catalase in Myeloid Cells Confers Acute Protection following Myocardial Infarction
Cabigas EB, Somasuntharam I, Brown ME, Che PL, Pendergrass KD, Chiang B, Taylor WR, Davis ME
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